Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs7838059 | chr8:10178810 | T/A | SGK223 | chr8:8175258-8244008:- | -0.36 | -5.92 | 6.04E-9 | Box Plot |
| THCA | rs7838131 | chr8:11596163 | G/A | SGK223 | chr8:8175258-8244008:- | 0.36 | 6.94 | 1.25E-11 | Box Plot |
| THCA | rs7838833 | chr8:10862764 | A/G | SGK223 | chr8:8175258-8244008:- | 0.39 | 7.08 | 5.05E-12 | Box Plot |
| THCA | rs7838897 | chr8:11207326 | C/A | SGK223 | chr8:8175258-8244008:- | -0.37 | -6.89 | 1.75E-11 | Box Plot |
| THCA | rs7839053 | chr8:11207431 | C/T | SGK223 | chr8:8175258-8244008:- | -0.37 | -6.91 | 1.53E-11 | Box Plot |
| THCA | rs7839307 | chr8:11198792 | A/G | SGK223 | chr8:8175258-8244008:- | -0.41 | -7.78 | 4.65E-14 | Box Plot |
| THCA | rs78393555 | chr6:151753011 | A/G | NEK5 | chr13:52607747-52703214:- | 0.6 | 6.9 | 1.68E-11 | Box Plot |
| THCA | rs7841394 | chr8:11185671 | G/T | SGK223 | chr8:8175258-8244008:- | -0.35 | -6.67 | 7.29E-11 | Box Plot |
| THCA | rs7842154 | chr8:10172085 | T/G | SGK223 | chr8:8175258-8244008:- | -0.35 | -6.2 | 1.24E-9 | Box Plot |
| THCA | rs7842663 | chr8:11794050 | A/C | SGK223 | chr8:8175258-8244008:- | -0.39 | -7.19 | 2.59E-12 | Box Plot |
| THCA | rs7842810 | chr8:11794163 | A/G | SGK223 | chr8:8175258-8244008:- | -0.46 | -8.54 | 1.81E-16 | Box Plot |
| THCA | rs7843470 | chr8:10784492 | C/G | SGK223 | chr8:8175258-8244008:- | 0.33 | 6.49 | 2.2E-10 | Box Plot |
| THCA | rs7843987 | chr8:11422130 | T/C | SGK223 | chr8:8175258-8244008:- | 0.42 | 7.83 | 3.11E-14 | Box Plot |
| THCA | rs7844536 | chr8:11034028 | A/G | SGK223 | chr8:8175258-8244008:- | 0.46 | 8.62 | 9.84E-17 | Box Plot |
| THCA | rs7844858 | chr8:11392659 | T/A | SGK223 | chr8:8175258-8244008:- | -0.35 | -6.41 | 3.52E-10 | Box Plot |